Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DXC16_13490 | Not Available | Negative | 3005538 - 3007265 | 67962.9 |
| l-aspartate oxidase | DXC16_13495 | Not Available | Negative | 3007515 - 3009095 | 59011.7 |
| orf6n domain-containing protein | DXC16_13500 | Not Available | Positive | 3009251 - 3009811 | 21509.0 |
| hypothetical protein | DXC16_13505 | Not Available | Positive | 3009887 - 3010297 | 15494.5 |
| hypothetical protein | DXC16_13510 | Not Available | Positive | 3010301 - 3010714 | 15716.4 |
| dihydrolipoyl dehydrogenase | DXC16_13515 | Not Available | Positive | 3010730 - 3012070 | 47679.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DXC16_13520 | Not Available | Positive | 3012070 - 3013470 | 52320.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DXC16_13525 | Not Available | Positive | 3013641 - 3014483 | 31850.9 |
| gluconate 5-dehydrogenase | DXC16_13530 | Not Available | Positive | 3014520 - 3015323 | 28590.5 |
| duf4861 domain-containing protein | DXC16_13535 | Not Available | Positive | 3015420 - 3016592 | 42906.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

