Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | DXC16_13380 | Not Available | Negative | 2970474 - 2970836 | 13656.3 |
| duf3408 domain-containing protein | DXC16_13385 | Not Available | Negative | 2970861 - 2971310 | 16982.9 |
| para family protein | DXC16_13390 | Not Available | Negative | 2971316 - 2972071 | 28317.3 |
| hypothetical protein | DXC16_13400 | Not Available | Positive | 2972304 - 2972483 | 6253.58 |
| moba protein | DXC16_13405 | Not Available | Positive | 2972752 - 2973180 | 16824.5 |
| relaxase | DXC16_13410 | Not Available | Positive | 2973159 - 2974406 | 46565.8 |
| susc/raga family tonb-linked outer membrane protein | DXC16_13420 | Not Available | Positive | 2975396 - 2978104 | 101558.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_13425 | Not Available | Positive | 2978125 - 2979804 | 63688.1 |
| duf4859 domain-containing protein | DXC16_13430 | Not Available | Positive | 2979836 - 2980846 | 36202.2 |
| duf4859 domain-containing protein | DXC16_13435 | Not Available | Positive | 2981102 - 2983366 | 84454.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

