Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3989 domain-containing protein | DXC16_13330 | Not Available | Negative | 2962975 - 2963283 | 11764.5 |
| conjugative transposon protein trak | DXC16_13335 | Not Available | Negative | 2963289 - 2963912 | 24030.7 |
| conjugative transposon protein traj | DXC16_13340 | Not Available | Negative | 2964046 - 2964453 | 14518.8 |
| conjugative transposon protein traj | DXC16_13345 | Not Available | Negative | 2964464 - 2965301 | 31789.3 |
| duf4141 domain-containing protein | DXC16_13350 | Not Available | Negative | 2965305 - 2965934 | 24231.4 |
| duf3876 domain-containing protein | DXC16_13355 | Not Available | Negative | 2965965 - 2966348 | 14504.5 |
| trag family conjugative transposon atpase | DXC16_13360 | Not Available | Negative | 2966382 - 2968883 | 96371.7 |
| duf4133 domain-containing protein | DXC16_13365 | Not Available | Negative | 2968880 - 2969212 | 12586.7 |
| duf4134 domain-containing protein | DXC16_13370 | Not Available | Negative | 2969223 - 2969534 | 10733.2 |
| conjugal transfer protein trad | DXC16_13375 | Not Available | Negative | 2969737 - 2970477 | 27876.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

