Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3873 domain-containing protein | DXC16_13280 | Not Available | Positive | 2956847 - 2957065 | 8460.93 |
| hypothetical protein | DXC16_13285 | Not Available | Positive | 2957005 - 2957310 | 11151.9 |
| hypothetical protein | DXC16_13290 | Not Available | Positive | 2957364 - 2957672 | 11793.3 |
| hypothetical protein | DXC16_13295 | Not Available | Positive | 2957789 - 2958010 | 8090.73 |
| lysozyme | DXC16_13300 | Not Available | Negative | 2958073 - 2958600 | 20326.0 |
| duf3872 domain-containing protein | DXC16_13305 | Not Available | Negative | 2958597 - 2959103 | 19333.9 |
| dna primase | DXC16_13310 | Not Available | Negative | 2959103 - 2960002 | 33701.4 |
| conjugal transfer protein trao | DXC16_13315 | Not Available | Negative | 2960011 - 2960586 | 20999.3 |
| conjugative transposon protein tran | DXC16_13320 | Not Available | Negative | 2960589 - 2961575 | 37131.9 |
| conjugative transposon protein tram | DXC16_13325 | Not Available | Negative | 2961645 - 2962994 | 49010.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

