Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DXC16_13120 | Not Available | Negative | 2919355 - 2920422 | 39187.2 |
| o-antigen ligase domain-containing protein | DXC16_13125 | Not Available | Negative | 2920475 - 2922127 | 62053.4 |
| transglutaminase domain-containing protein | DXC16_13130 | Not Available | Negative | 2922130 - 2923641 | 58310.2 |
| signal peptidase i | DXC16_13135 | Not Available | Negative | 2923643 - 2924545 | 35333.0 |
| hypothetical protein | DXC16_13140 | Not Available | Negative | 2924554 - 2926458 | 73726.7 |
| 6-bladed beta-propeller | DXC16_13145 | Not Available | Negative | 2926738 - 2927832 | 41967.5 |
| hypothetical protein | DXC16_13150 | Not Available | Negative | 2927921 - 2928169 | 9017.95 |
| hypothetical protein | DXC16_13160 | Not Available | Negative | 2929223 - 2929444 | 7881.59 |
| dna-binding response regulator | DXC16_13165 | Not Available | Positive | 2929698 - 2930696 | 38380.6 |
| hypothetical protein | DXC16_13170 | Not Available | Negative | 2931438 - 2932517 | 40319.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

