Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DXC16_00955 | Not Available | Negative | 176474 - 177787 | 51547.8 |
| atpase | DXC16_00960 | Not Available | Negative | 177759 - 179381 | 62415.6 |
| class i sam-dependent methyltransferase | DXC16_00965 | Not Available | Positive | 179632 - 180366 | 27967.4 |
| f0f1 atp synthase subunit gamma | DXC16_00970 | Not Available | Negative | 180454 - 181323 | 32518.7 |
| atp synthase subunit alpha | DXC16_00975 | Not Available | Negative | 181326 - 182918 | 57717.7 |
| f0f1 atp synthase subunit delta | DXC16_00980 | Not Available | Negative | 183040 - 183597 | 21019.8 |
| atp synthase subunit b | DXC16_00985 | Not Available | Negative | 183603 - 184103 | 18885.0 |
| atp synthase f0 subunit c | DXC16_00990 | Not Available | Negative | 184114 - 184368 | 8151.6 |
| atp synthase f0 subunit a | DXC16_00995 | Not Available | Negative | 184400 - 185491 | 40577.2 |
| hypothetical protein | DXC16_01000 | Not Available | Negative | 185493 - 185906 | 16367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

