Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | DXC16_12720 | Not Available | Positive | 2791517 - 2792242 | 28652.8 |
| Trna-leu | Not Available | Not Available | Positive | 2792611 - 2792695 | Not Available |
| peptidase s41 | DXC16_12730 | Not Available | Negative | 2792764 - 2793792 | 39153.0 |
| duf3316 domain-containing protein | DXC16_12735 | Not Available | Negative | 2793801 - 2794646 | 31970.1 |
| dna gyrase/topoisomerase iv subunit a | DXC16_12740 | Not Available | Negative | 2794650 - 2797343 | 102634.0 |
| glycine--trna ligase | DXC16_12745 | Not Available | Positive | 2797495 - 2799036 | 59436.0 |
| peptidylprolyl isomerase | DXC16_12750 | Not Available | Positive | 2799047 - 2799688 | 23291.7 |
| aspartate-semialdehyde dehydrogenase | DXC16_12755 | Not Available | Negative | 2800167 - 2801177 | 37267.8 |
| cation:proton antiporter | DXC16_12760 | Not Available | Positive | 2801343 - 2803490 | 80167.6 |
| trna threonylcarbamoyladenosine dehydratase | DXC16_12765 | Not Available | Positive | 2803477 - 2804199 | 27062.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

