Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DXC16_12660 | Not Available | Negative | 2775702 - 2777552 | 70808.9 |
| hypothetical protein | DXC16_12665 | Not Available | Positive | 2777801 - 2779396 | 62535.7 |
| hypothetical protein | DXC16_12670 | Not Available | Negative | 2779503 - 2779799 | 11332.5 |
| hypothetical protein | DXC16_12680 | Not Available | Negative | 2779923 - 2780168 | 9481.4 |
| arac family transcriptional regulator | DXC16_12690 | Not Available | Negative | 2782867 - 2783352 | 19011.1 |
| mfs transporter | DXC16_12695 | Not Available | Negative | 2784058 - 2785413 | 49058.2 |
| 4-alpha-glucanotransferase | DXC16_12700 | Not Available | Negative | 2785487 - 2788165 | 104530.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DXC16_12705 | Not Available | Negative | 2788493 - 2790457 | 72969.4 |
| 30s ribosomal protein s20 | DXC16_12710 | Not Available | Negative | 2790905 - 2791159 | 9698.07 |
| Trna-glu | Not Available | Not Available | Positive | 2791199 - 2791273 | Not Available |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

