Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_12610 | Not Available | Positive | 2758577 - 2759764 | 44412.8 |
| peptidase | DXC16_12615 | Not Available | Positive | 2760006 - 2761865 | 67222.0 |
| hypothetical protein | DXC16_12620 | Not Available | Positive | 2761884 - 2762864 | 34852.3 |
| alpha-amylase | DXC16_12625 | Not Available | Negative | 2763035 - 2765614 | 97663.8 |
| duf5115 domain-containing protein | DXC16_12630 | Not Available | Negative | 2765704 - 2767098 | 50653.2 |
| susf/suse family outer membrane protein | DXC16_12635 | Not Available | Negative | 2767143 - 2768279 | 41598.3 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_12640 | Not Available | Negative | 2768308 - 2770002 | 63567.8 |
| tonb-dependent receptor | DXC16_12645 | Not Available | Negative | 2770015 - 2773044 | 111498.0 |
| hypothetical protein | DXC16_12650 | Not Available | Negative | 2773212 - 2773391 | 7024.59 |
| glycoside hydrolase family 97 protein | DXC16_12655 | Not Available | Negative | 2773444 - 2775660 | 84390.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

