Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | DXC16_12510 | Not Available | Positive | 2733901 - 2734653 | 27654.6 |
| fe-s cluster assembly protein sufd | DXC16_12515 | Not Available | Positive | 2734683 - 2736026 | 50473.3 |
| cysteine desulfurase | DXC16_12520 | Not Available | Positive | 2736033 - 2737247 | 45071.1 |
| hypothetical protein | DXC16_12525 | Not Available | Negative | 2737323 - 2737529 | 7938.38 |
| hypothetical protein | DXC16_12530 | Not Available | Positive | 2737477 - 2737755 | 10526.9 |
| hypothetical protein | DXC16_12535 | Not Available | Positive | 2737812 - 2738066 | 9954.58 |
| glycoside hydrolase | DXC16_12540 | Not Available | Negative | 2738157 - 2740091 | 72988.9 |
| duf4981 domain-containing protein | DXC16_12545 | Not Available | Negative | 2740109 - 2743285 | 121397.0 |
| lysine exporter lyso family protein | DXC16_12550 | Not Available | Negative | 2743299 - 2743901 | 21649.9 |
| duf340 domain-containing protein | DXC16_12555 | Not Available | Negative | 2743898 - 2744179 | 10217.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

