Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_12460 | Not Available | Positive | 2722808 - 2723764 | 36408.5 |
| radical sam protein | DXC16_12465 | Not Available | Positive | 2723761 - 2724831 | 41092.6 |
| hypothetical protein | DXC16_12470 | Not Available | Positive | 2724852 - 2725100 | 8752.23 |
| mfs transporter araj | DXC16_12475 | Not Available | Positive | 2725293 - 2726474 | 42098.0 |
| hypothetical protein | DXC16_12480 | Not Available | Negative | 2726435 - 2726854 | 15775.0 |
| ribosome maturation factor rimp | DXC16_12485 | Not Available | Positive | 2726993 - 2727460 | 17915.3 |
| transcription termination/antitermination protein nusa | DXC16_12490 | Not Available | Positive | 2727463 - 2728719 | 47697.0 |
| translation initiation factor if-2 | DXC16_12495 | Not Available | Positive | 2728761 - 2731772 | 111143.0 |
| cvpa family protein | DXC16_12500 | Not Available | Positive | 2731911 - 2732414 | 18078.1 |
| fe-s cluster assembly protein sufb | DXC16_12505 | Not Available | Positive | 2732422 - 2733873 | 54021.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

