Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | DXC16_12410 | Not Available | Positive | 2712740 - 2713513 | 27207.2 |
| rna polymerase sigma factor | DXC16_12415 | Not Available | Positive | 2713577 - 2714086 | 20188.3 |
| hypothetical protein | DXC16_12420 | Not Available | Positive | 2714076 - 2714555 | 18339.8 |
| duf2807 domain-containing protein | DXC16_12425 | Not Available | Negative | 2714753 - 2715484 | 25978.6 |
| m48 family peptidase | DXC16_12430 | Not Available | Positive | 2715591 - 2716295 | 27306.5 |
| acetylxylan esterase | DXC16_12435 | Not Available | Positive | 2716316 - 2717626 | 49264.2 |
| hypothetical protein | DXC16_12440 | Not Available | Positive | 2717731 - 2718381 | 24753.7 |
| hypothetical protein | DXC16_12445 | Not Available | Positive | 2718511 - 2718807 | 11678.1 |
| arac family transcriptional regulator | DXC16_12450 | Not Available | Positive | 2719416 - 2719916 | 19502.5 |
| hypothetical protein | DXC16_12455 | Not Available | Positive | 2719982 - 2722468 | 89243.1 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

