Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_00905 | Not Available | Positive | 162500 - 163723 | 48463.2 |
| hypothetical protein | DXC16_00910 | Not Available | Positive | 163729 - 164310 | 23365.4 |
| atp-binding protein | DXC16_00915 | Not Available | Positive | 164294 - 167947 | 144642.0 |
| helicase | DXC16_00920 | Not Available | Positive | 168265 - 170322 | 79335.9 |
| hypothetical protein | DXC16_00925 | Not Available | Positive | 170503 - 170625 | 4309.2 |
| hypothetical protein | DXC16_00930 | Not Available | Negative | 170702 - 171580 | 33621.2 |
| hypothetical protein | DXC16_00935 | Not Available | Positive | 171827 - 173185 | 51090.7 |
| phosphonoacetaldehyde hydrolase | DXC16_00940 | Not Available | Positive | 173228 - 174016 | 29135.4 |
| 2-aminoethylphosphonate--pyruvate transaminase | DXC16_00945 | Not Available | Positive | 174023 - 175111 | 40693.9 |
| porin | DXC16_00950 | Not Available | Negative | 175179 - 176330 | 43068.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

