Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4491 family protein | DXC16_12360 | Not Available | Negative | 2699836 - 2700150 | 12155.1 |
| asnc family transcriptional regulator | DXC16_12365 | Not Available | Negative | 2700157 - 2700615 | 17087.9 |
| hypothetical protein | DXC16_12370 | Not Available | Negative | 2700732 - 2701115 | 15190.0 |
| hlyc/corc family transporter | DXC16_12375 | Not Available | Negative | 2701138 - 2702424 | 48001.9 |
| nudix domain-containing protein | DXC16_12380 | Not Available | Positive | 2702559 - 2703083 | 19841.6 |
| tetratricopeptide repeat protein | DXC16_12385 | Not Available | Positive | 2703093 - 2705996 | 111179.0 |
| tonb-dependent receptor | DXC16_12390 | Not Available | Positive | 2706020 - 2707717 | 64295.7 |
| type i dna topoisomerase | DXC16_12395 | Not Available | Positive | 2707839 - 2710277 | 91403.2 |
| shikimate kinase | DXC16_12400 | Not Available | Positive | 2710274 - 2710801 | 20453.7 |
| biosynthetic arginine decarboxylase | DXC16_12405 | Not Available | Positive | 2710843 - 2712735 | 71492.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

