Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | DXC16_12310 | Not Available | Positive | 2691276 - 2692577 | 50090.6 |
| triose-phosphate isomerase | DXC16_12315 | Not Available | Positive | 2692608 - 2693363 | 26875.2 |
| spor domain-containing protein | DXC16_12320 | Not Available | Positive | 2693469 - 2693927 | 17067.7 |
| gtp cyclohydrolase i fole | DXC16_12325 | Not Available | Positive | 2693932 - 2694525 | 22693.7 |
| dna primase | DXC16_12330 | Not Available | Negative | 2694538 - 2696613 | 78742.5 |
| malate dehydrogenase | DXC16_12335 | Not Available | Negative | 2696691 - 2697692 | 36087.5 |
| transcriptional regulator | DXC16_12340 | Not Available | Negative | 2697936 - 2698226 | 10732.2 |
| hypothetical protein | DXC16_12345 | Not Available | Negative | 2698237 - 2698824 | 22318.1 |
| hypothetical protein | DXC16_12350 | Not Available | Negative | 2698854 - 2699102 | 9849.92 |
| hypothetical protein | DXC16_12355 | Not Available | Positive | 2699507 - 2699744 | 8904.25 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

