Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | DXC16_12260 | Not Available | Positive | 2682965 - 2683681 | 26433.6 |
| mota/tolq/exbb proton channel family protein | DXC16_12265 | Not Available | Positive | 2683681 - 2684394 | 25739.8 |
| biopolymer transporter exbd | DXC16_12270 | Not Available | Positive | 2684401 - 2684820 | 16032.8 |
| tonb family protein | DXC16_12275 | Not Available | Positive | 2684830 - 2685723 | 31428.5 |
| dj-1 family protein | DXC16_12280 | Not Available | Positive | 2685727 - 2686278 | 19270.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DXC16_12285 | Not Available | Positive | 2686275 - 2686934 | 24344.4 |
| atp-dependent dna helicase recg | DXC16_12290 | Not Available | Positive | 2686936 - 2689032 | 79778.0 |
| nucleoside-diphosphate kinase | DXC16_12295 | Not Available | Positive | 2689253 - 2689717 | 17401.2 |
| lysm peptidoglycan-binding domain-containing protein | DXC16_12300 | Not Available | Positive | 2689740 - 2690630 | 33332.2 |
| duf1599 domain-containing protein | DXC16_12305 | Not Available | Positive | 2690744 - 2691286 | 20764.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

