Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXC16_12205 | Not Available | Positive | 2667350 - 2668984 | 62640.4 |
| duf5110 domain-containing protein | DXC16_12210 | Not Available | Positive | 2669054 - 2671513 | 95186.6 |
| glycosyl hydrolase | DXC16_12215 | Not Available | Positive | 2671567 - 2673918 | 88916.2 |
| addiction module toxin rele | DXC16_12220 | Not Available | Negative | 2673971 - 2674312 | 12875.8 |
| hypothetical protein | DXC16_12225 | Not Available | Negative | 2674302 - 2674577 | 10421.8 |
| exonuclease subunit sbcd | DXC16_12230 | Not Available | Positive | 2674749 - 2675951 | 44926.9 |
| atp-dependent exonuclease | DXC16_12235 | Not Available | Positive | 2675948 - 2679031 | 116339.0 |
| hypothetical protein | DXC16_12240 | Not Available | Positive | 2679080 - 2679532 | 17226.2 |
| acyloxyacyl hydrolase | DXC16_12250 | Not Available | Negative | 2680492 - 2681802 | 49681.4 |
| nad kinase | DXC16_12255 | Not Available | Negative | 2681974 - 2682846 | 32172.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

