Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhum protein | DXC16_12000 | Not Available | Negative | 2603223 - 2603582 | 13599.8 |
| site-specific integrase | DXC16_12005 | Not Available | Negative | 2603595 - 2604830 | 47968.3 |
| tlpa family protein disulfide reductase | DXC16_12010 | Not Available | Positive | 2605179 - 2605700 | 19811.9 |
| phosphatase pap2 family protein | DXC16_12020 | Not Available | Positive | 2608369 - 2609145 | 29161.7 |
| atpase | DXC16_12025 | Not Available | Positive | 2609384 - 2610529 | 42890.4 |
| anaerobic sulfatase-maturation protein | DXC16_12030 | Not Available | Positive | 2610723 - 2611958 | 48053.5 |
| 50s ribosomal protein l34 | DXC16_12035 | Not Available | Negative | 2612137 - 2612292 | 6019.34 |
| elongation factor p | DXC16_12040 | Not Available | Positive | 2612495 - 2613061 | 21126.5 |
| glycosyltransferase | DXC16_12045 | Not Available | Positive | 2613163 - 2614152 | 37604.6 |
| dna repair protein radc | DXC16_12050 | Not Available | Positive | 2614226 - 2614915 | 25617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

