Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DXC16_11945 | Not Available | Negative | 2589698 - 2590822 | 43529.2 |
| dna methylase | DXC16_11950 | Not Available | Negative | 2591030 - 2596861 | 220102.0 |
| duf1896 domain-containing protein | DXC16_11955 | Not Available | Negative | 2596851 - 2597444 | 22462.3 |
| type ia dna topoisomerase | DXC16_11960 | Not Available | Negative | 2597472 - 2599562 | 77459.8 |
| duf4099 domain-containing protein | DXC16_11965 | Not Available | Negative | 2599626 - 2601233 | 61132.9 |
| duf3408 domain-containing protein | DXC16_11970 | Not Available | Negative | 2601257 - 2601532 | 11041.4 |
| dna-binding protein | DXC16_11975 | Not Available | Negative | 2601556 - 2601909 | 13947.8 |
| dna-binding protein | DXC16_11980 | Not Available | Negative | 2601913 - 2602284 | 14322.3 |
| dna-binding protein | DXC16_11990 | Not Available | Positive | 2602491 - 2602784 | 11114.7 |
| dna-binding protein | DXC16_11995 | Not Available | Positive | 2602812 - 2603117 | 11902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

