Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_11885 | Not Available | Negative | 2575186 - 2575638 | 17266.7 |
| atp-dependent dna helicase recg | DXC16_11890 | Not Available | Negative | 2575641 - 2577089 | 54937.1 |
| rtec protein | DXC16_11895 | Not Available | Negative | 2577237 - 2577860 | 23675.3 |
| sigma-54-dependent fis family transcriptional regulator | DXC16_11905 | Not Available | Negative | 2578833 - 2580140 | 49430.2 |
| hybrid sensor histidine kinase/response regulator | DXC16_11910 | Not Available | Negative | 2580137 - 2582470 | 89069.5 |
| hypothetical protein | DXC16_11920 | Not Available | Negative | 2582944 - 2584593 | 60007.4 |
| fimbrillin family protein | DXC16_11925 | Not Available | Negative | 2584623 - 2586350 | 63477.3 |
| fimbrillin family protein | DXC16_11930 | Not Available | Negative | 2586471 - 2587502 | 36094.2 |
| hypothetical protein | DXC16_11935 | Not Available | Negative | 2587534 - 2588424 | 31679.0 |
| duf3575 domain-containing protein | DXC16_11940 | Not Available | Negative | 2588440 - 2589498 | 39664.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

