Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper-translocating p-type atpase | DXC16_00855 | Not Available | Negative | 148178 - 150391 | 79986.0 |
| duf3298 domain-containing protein | DXC16_00860 | Not Available | Positive | 150570 - 151418 | 32059.0 |
| ribosomal rna small subunit methyltransferase g | DXC16_00865 | Not Available | Positive | 151439 - 152068 | 23835.2 |
| mbl fold metallo-hydrolase | DXC16_00870 | Not Available | Positive | 152086 - 152724 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DXC16_00875 | Not Available | Positive | 152760 - 155609 | 105224.0 |
| s9 family peptidase | DXC16_00880 | Not Available | Negative | 155890 - 158604 | 102704.0 |
| hypothetical protein | DXC16_00885 | Not Available | Negative | 158637 - 158873 | 8867.62 |
| hypothetical protein | DXC16_00890 | Not Available | Positive | 158997 - 159224 | 8214.64 |
| formate--tetrahydrofolate ligase | DXC16_00895 | Not Available | Negative | 159256 - 160923 | 60482.1 |
| iron-containing alcohol dehydrogenase | DXC16_00900 | Not Available | Positive | 161012 - 162187 | 43312.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

