Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4133 domain-containing protein | DXC16_11835 | Not Available | Negative | 2567238 - 2567570 | 12582.8 |
| duf4134 domain-containing protein | DXC16_11840 | Not Available | Negative | 2567582 - 2567908 | 11130.6 |
| conjugal transfer protein trad | DXC16_11845 | Not Available | Negative | 2568113 - 2568829 | 26882.8 |
| duf3408 domain-containing protein | DXC16_11850 | Not Available | Negative | 2568826 - 2569068 | 9333.48 |
| duf3408 domain-containing protein | DXC16_11855 | Not Available | Negative | 2569088 - 2569441 | 13698.6 |
| duf3408 domain-containing protein | DXC16_11860 | Not Available | Negative | 2569444 - 2569881 | 16464.7 |
| para family protein | DXC16_11865 | Not Available | Negative | 2569884 - 2570933 | 39525.4 |
| moba protein | DXC16_11870 | Not Available | Positive | 2571353 - 2571856 | 19683.7 |
| relaxase | DXC16_11875 | Not Available | Positive | 2571835 - 2573085 | 46812.2 |
| conjugal transfer protein trag | DXC16_11880 | Not Available | Positive | 2573122 - 2575128 | 76514.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

