Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | DXC16_11780 | Not Available | Negative | 2557292 - 2558191 | 33681.2 |
| conjugal transfer protein trao | DXC16_11785 | Not Available | Negative | 2558202 - 2558777 | 20977.2 |
| conjugative transposon protein tran | DXC16_11790 | Not Available | Negative | 2558788 - 2559789 | 37539.2 |
| conjugative transposon protein tram | DXC16_11795 | Not Available | Negative | 2559832 - 2561181 | 48913.0 |
| duf3989 domain-containing protein | DXC16_11800 | Not Available | Negative | 2561162 - 2561476 | 11874.5 |
| conjugative transposon protein trak | DXC16_11805 | Not Available | Negative | 2561484 - 2562107 | 24016.7 |
| conjugative transposon protein traj | DXC16_11810 | Not Available | Negative | 2562239 - 2562902 | 24527.1 |
| conjugative transposon protein traj | DXC16_11815 | Not Available | Negative | 2562913 - 2563563 | 24723.4 |
| duf4141 domain-containing protein | DXC16_11820 | Not Available | Negative | 2563567 - 2564196 | 24081.2 |
| trag family conjugative transposon atpase | DXC16_11830 | Not Available | Negative | 2564737 - 2567241 | 95908.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

