Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_11665 | Not Available | Positive | 2544862 - 2545188 | 11882.3 |
| duf2520 domain-containing protein | DXC16_11670 | Not Available | Positive | 2545188 - 2545994 | 29767.2 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DXC16_11675 | Not Available | Positive | 2546000 - 2546518 | 19125.2 |
| septum formation protein maf | DXC16_11680 | Not Available | Positive | 2546536 - 2547117 | 21744.3 |
| 2-hydroxyacid dehydrogenase | DXC16_11685 | Not Available | Positive | 2547184 - 2548191 | 37615.4 |
| duf3843 family protein | DXC16_11690 | Not Available | Negative | 2548188 - 2549357 | 45914.6 |
| duf2721 domain-containing protein | DXC16_11695 | Not Available | Positive | 2549476 - 2549865 | 14601.4 |
| mfs transporter | DXC16_11700 | Not Available | Negative | 2549867 - 2551042 | 42744.6 |
| hypothetical protein | DXC16_11705 | Not Available | Negative | 2551459 - 2551650 | 6889.4 |
| hypothetical protein | DXC16_11715 | Not Available | Positive | 2552104 - 2552319 | 7880.14 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

