Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase family protein | DXC16_11615 | Not Available | Positive | 2536355 - 2537173 | 30789.0 |
| sdr family nad(p)-dependent oxidoreductase | DXC16_11620 | Not Available | Positive | 2537178 - 2537936 | 27173.0 |
| alpha-amlyase | DXC16_11625 | Not Available | Negative | 2538032 - 2538280 | 9267.24 |
| sodium ion-translocating decarboxylase subunit beta | DXC16_11630 | Not Available | Negative | 2538455 - 2539615 | 40880.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DXC16_11635 | Not Available | Negative | 2539617 - 2540048 | 15152.5 |
| lamin tail domain-containing protein | DXC16_11640 | Not Available | Negative | 2540072 - 2541001 | 34102.0 |
| acyl-coa carboxylase subunit beta | DXC16_11645 | Not Available | Negative | 2541029 - 2542582 | 56473.9 |
| methylmalonyl-coa epimerase | DXC16_11650 | Not Available | Negative | 2542685 - 2543098 | 14910.1 |
| gnat family n-acetyltransferase | DXC16_11655 | Not Available | Negative | 2543255 - 2544277 | 40024.0 |
| nad(p)h nitroreductase | DXC16_11660 | Not Available | Positive | 2544323 - 2544859 | 20051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

