Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_11550 | Not Available | Negative | 2526254 - 2526616 | 13798.8 |
| site-specific integrase | DXC16_11555 | Not Available | Negative | 2526613 - 2527836 | 46423.8 |
| site-specific integrase | DXC16_11560 | Not Available | Negative | 2527868 - 2529097 | 47258.8 |
| hypothetical protein | DXC16_11575 | Not Available | Negative | 2530188 - 2530400 | 8649.7 |
| ph domain-containing protein | DXC16_11580 | Not Available | Negative | 2530520 - 2530963 | 16630.7 |
| hypothetical protein | DXC16_11585 | Not Available | Negative | 2531132 - 2531566 | 16911.9 |
| crp/fnr family transcriptional regulator | DXC16_11595 | Not Available | Positive | 2532095 - 2532658 | 22255.1 |
| acyltransferase | DXC16_11600 | Not Available | Positive | 2532776 - 2533927 | 43063.7 |
| transcriptional repressor | DXC16_11605 | Not Available | Negative | 2534100 - 2534525 | 16149.6 |
| heavy metal translocating p-type atpase | DXC16_11610 | Not Available | Negative | 2534539 - 2536257 | 62486.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

