Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_11500 | Not Available | Negative | 2520755 - 2521066 | 11910.2 |
| hypothetical protein | DXC16_11505 | Not Available | Positive | 2521370 - 2521813 | 16996.4 |
| hypothetical protein | DXC16_11510 | Not Available | Positive | 2521994 - 2522050 | 2161.67 |
| hypothetical protein | DXC16_11515 | Not Available | Negative | 2522106 - 2522855 | 28555.4 |
| mobilization protein | DXC16_11520 | Not Available | Negative | 2522888 - 2523838 | 36207.5 |
| plasmid mobilization relaxosome protein mobc | DXC16_11525 | Not Available | Negative | 2523835 - 2524248 | 15637.0 |
| duf3408 domain-containing protein | DXC16_11530 | Not Available | Negative | 2524433 - 2524915 | 18450.9 |
| hypothetical protein | DXC16_11535 | Not Available | Negative | 2524929 - 2525279 | 13248.7 |
| dna-binding protein | DXC16_11540 | Not Available | Positive | 2525313 - 2525624 | 12302.7 |
| dna-binding protein | DXC16_11545 | Not Available | Positive | 2525707 - 2526015 | 12220.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

