Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXC16_11385 | Not Available | Positive | 2494084 - 2496945 | 106320.0 |
| duf4876 domain-containing protein | DXC16_11390 | Not Available | Positive | 2497031 - 2498230 | 44388.7 |
| hypothetical protein | DXC16_11395 | Not Available | Positive | 2498254 - 2499816 | 58785.0 |
| hypothetical protein | DXC16_11400 | Not Available | Positive | 2499874 - 2502021 | 82892.9 |
| heat repeat domain-containing protein | DXC16_11405 | Not Available | Positive | 2502028 - 2504229 | 84915.5 |
| heat repeat domain-containing protein | DXC16_11410 | Not Available | Positive | 2504280 - 2506424 | 82720.6 |
| transposase | DXC16_11420 | Not Available | Positive | 2506834 - 2507565 | 28628.0 |
| class i sam-dependent dna methyltransferase | DXC16_11425 | Not Available | Negative | 2507492 - 2511040 | 137025.0 |
| hypothetical protein | DXC16_11430 | Not Available | Negative | 2511236 - 2511403 | 6542.07 |
| hypothetical protein | DXC16_11435 | Not Available | Positive | 2511377 - 2511568 | 7318.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

