Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | DXC16_11335 | Not Available | Positive | 2485099 - 2486079 | 34119.5 |
| abc transporter atp-binding protein | DXC16_11340 | Not Available | Positive | 2486043 - 2486834 | 29565.2 |
| duf2284 domain-containing protein | DXC16_11345 | Not Available | Positive | 2486831 - 2487397 | 21915.1 |
| hypothetical protein | DXC16_11350 | Not Available | Negative | 2487326 - 2487598 | 10378.5 |
| hypothetical protein | DXC16_11355 | Not Available | Negative | 2487981 - 2488235 | 9355.32 |
| duf3408 domain-containing protein | DXC16_11360 | Not Available | Positive | 2488312 - 2488728 | 15366.5 |
| duf3408 domain-containing protein | DXC16_11365 | Not Available | Positive | 2488758 - 2489162 | 14785.0 |
| para family protein | DXC16_11370 | Not Available | Positive | 2489238 - 2490026 | 30108.6 |
| duf3991 domain-containing protein | DXC16_11375 | Not Available | Positive | 2491284 - 2493164 | 70291.0 |
| hypothetical protein | DXC16_11380 | Not Available | Positive | 2493154 - 2493351 | 7506.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

