Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_00810 | Not Available | Positive | 140997 - 141305 | 11653.9 |
| hypothetical protein | DXC16_00815 | Not Available | Negative | 141432 - 141614 | 7116.21 |
| hypothetical protein | DXC16_00820 | Not Available | Negative | 142184 - 142393 | 7947.52 |
| hypothetical protein | DXC16_00825 | Not Available | Negative | 142562 - 142876 | 11444.2 |
| hypothetical protein | DXC16_00830 | Not Available | Positive | 143122 - 143604 | 18372.9 |
| long-chain fatty acid--coa ligase | DXC16_00835 | Not Available | Positive | 143816 - 145480 | 62496.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 146509 - 146619 | Not Available |
| lipoyl(octanoyl) transferase lipb | DXC16_00840 | Not Available | Negative | 145690 - 146778 | 40885.7 |
| phosphohydrolase | DXC16_00845 | Not Available | Positive | 146844 - 147545 | 27585.1 |
| hypothetical protein | DXC16_00850 | Not Available | Positive | 147542 - 148090 | 20508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

