Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_11160 | Not Available | Positive | 2444708 - 2445919 | 45874.6 |
| hypothetical protein | DXC16_11165 | Not Available | Positive | 2446347 - 2446589 | 8960.09 |
| port family protein | DXC16_11170 | Not Available | Positive | 2446605 - 2447381 | 29121.6 |
| arylsulfatase | DXC16_11180 | Not Available | Negative | 2448088 - 2449605 | 57821.3 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DXC16_11190 | Not Available | Negative | 2449821 - 2453366 | 129303.0 |
| atp-binding protein | DXC16_11195 | Not Available | Negative | 2453409 - 2454587 | 46146.3 |
| hypothetical protein | DXC16_11200 | Not Available | Positive | 2454690 - 2455901 | 45667.2 |
| tolc family protein | DXC16_11205 | Not Available | Negative | 2455940 - 2457313 | 51796.1 |
| multidrug efflux rnd transporter permease subunit | DXC16_11210 | Not Available | Negative | 2457335 - 2460436 | 113097.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_11215 | Not Available | Negative | 2460503 - 2461702 | 44405.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

