Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-sugar mutase | DXC16_11105 | Not Available | Positive | 2430930 - 2432675 | 64726.5 |
| eama family transporter | DXC16_11110 | Not Available | Positive | 2432858 - 2433778 | 34791.9 |
| aldose 1-epimerase family protein | DXC16_11115 | Not Available | Negative | 2433827 - 2434702 | 33987.7 |
| dna-binding response regulator | DXC16_11125 | Not Available | Positive | 2437047 - 2437811 | 29786.5 |
| wg repeat-containing protein | DXC16_11130 | Not Available | Positive | 2438077 - 2439771 | 63011.0 |
| hypothetical protein | DXC16_11135 | Not Available | Positive | 2439794 - 2440288 | 18040.2 |
| hypothetical protein | DXC16_11140 | Not Available | Positive | 2440439 - 2440924 | 18259.8 |
| hypothetical protein | DXC16_11145 | Not Available | Positive | 2440937 - 2441887 | 35079.1 |
| hypothetical protein | DXC16_11150 | Not Available | Positive | 2441895 - 2442830 | 34483.9 |
| wg repeat-containing protein | DXC16_11155 | Not Available | Positive | 2442842 - 2444689 | 68550.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

