Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DXC16_11055 | Not Available | Positive | 2420147 - 2421043 | 34399.8 |
| putative sulfate exporter family transporter | DXC16_11060 | Not Available | Positive | 2421132 - 2422118 | 35078.0 |
| duf4010 domain-containing protein | DXC16_11065 | Not Available | Negative | 2422211 - 2423500 | 48232.9 |
| hypothetical protein | DXC16_11070 | Not Available | Negative | 2423578 - 2424060 | 17550.9 |
| ecf transporter s component | DXC16_11075 | Not Available | Positive | 2424194 - 2424703 | 18481.4 |
| twin-arginine translocase tata/tate family subunit | DXC16_11080 | Not Available | Positive | 2424851 - 2425054 | 7276.18 |
| twin-arginine translocase subunit tatc | DXC16_11085 | Not Available | Positive | 2425061 - 2425891 | 32372.7 |
| alanine dehydrogenase | DXC16_11090 | Not Available | Negative | 2425978 - 2427069 | 39028.8 |
| m23 family peptidase | DXC16_11095 | Not Available | Positive | 2427263 - 2428933 | 62669.7 |
| dipeptidase | DXC16_11100 | Not Available | Positive | 2428976 - 2430616 | 61160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

