Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_11005 | Not Available | Negative | 2409497 - 2409895 | 15421.0 |
| hypothetical protein | DXC16_11010 | Not Available | Negative | 2409940 - 2410338 | 15086.8 |
| hypothetical protein | DXC16_11015 | Not Available | Negative | 2410353 - 2410646 | 11635.9 |
| hypothetical protein | DXC16_11020 | Not Available | Negative | 2410648 - 2411121 | 18959.2 |
| hypothetical protein | DXC16_11025 | Not Available | Negative | 2411069 - 2412163 | 41364.2 |
| hypothetical protein | DXC16_11030 | Not Available | Negative | 2412165 - 2412581 | 15257.3 |
| type vi secretion system needle protein hcp | DXC16_11035 | Not Available | Negative | 2412595 - 2413017 | 15865.0 |
| atp-dependent clp protease atp-binding subunit | DXC16_11040 | Not Available | Negative | 2413029 - 2415506 | 91904.7 |
| atp-dependent chaperone clpb | DXC16_11045 | Not Available | Negative | 2416690 - 2419278 | 97149.7 |
| hypothetical protein | DXC16_11050 | Not Available | Positive | 2419553 - 2420134 | 21468.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

