Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_10950 | Not Available | Negative | 2398360 - 2398908 | 20822.1 |
| hypothetical protein | DXC16_10955 | Not Available | Negative | 2398910 - 2399662 | 29628.0 |
| hypothetical protein | DXC16_10960 | Not Available | Negative | 2399687 - 2402179 | 95474.5 |
| pkd domain-containing protein | DXC16_10965 | Not Available | Negative | 2402188 - 2403093 | 34702.5 |
| hypothetical protein | DXC16_10970 | Not Available | Negative | 2403095 - 2403610 | 20766.9 |
| type vi secretion system transmembrane protein tssq | DXC16_10975 | Not Available | Negative | 2403623 - 2404126 | 19409.9 |
| hypothetical protein | DXC16_10980 | Not Available | Negative | 2404145 - 2405107 | 36752.2 |
| hypothetical protein | DXC16_10985 | Not Available | Negative | 2405128 - 2406288 | 44459.6 |
| hypothetical protein | DXC16_10990 | Not Available | Negative | 2406300 - 2407178 | 33966.7 |
| hypothetical protein | DXC16_11000 | Not Available | Negative | 2409042 - 2409506 | 17646.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

