Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3872 domain-containing protein | DXC16_10800 | Not Available | Negative | 2375576 - 2376037 | 17766.8 |
| conjugal transfer protein trao | DXC16_10805 | Not Available | Negative | 2376059 - 2376646 | 21820.1 |
| conjugative transposon protein tran | DXC16_10810 | Not Available | Negative | 2376643 - 2377557 | 34780.2 |
| conjugative transposon protein tram | DXC16_10815 | Not Available | Negative | 2377607 - 2378914 | 47988.2 |
| duf3989 domain-containing protein | DXC16_10820 | Not Available | Negative | 2378865 - 2379164 | 10903.4 |
| conjugative transposon protein trak | DXC16_10825 | Not Available | Negative | 2379161 - 2379784 | 23968.5 |
| conjugative transposon protein traj | DXC16_10830 | Not Available | Negative | 2379976 - 2380989 | 37339.7 |
| duf4141 domain-containing protein | DXC16_10835 | Not Available | Negative | 2380992 - 2381621 | 23832.5 |
| duf3876 domain-containing protein | DXC16_10840 | Not Available | Negative | 2381618 - 2381974 | 13252.0 |
| trag family conjugative transposon atpase | DXC16_10845 | Not Available | Negative | 2381971 - 2384505 | 97781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

