Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_00760 | Not Available | Negative | 136109 - 136366 | 9823.89 |
| dna-binding response regulator | DXC16_00765 | Not Available | Negative | 136392 - 136763 | 14372.6 |
| hypothetical protein | DXC16_00770 | Not Available | Negative | 136783 - 137010 | 8933.85 |
| Trna-ala | Not Available | Not Available | Positive | 137034 - 137118 | Not Available |
| hypothetical protein | DXC16_00780 | Not Available | Negative | 137187 - 137372 | 7334.69 |
| hypothetical protein | DXC16_00785 | Not Available | Negative | 137588 - 137770 | 6664.58 |
| hypothetical protein | DXC16_00790 | Not Available | Negative | 138122 - 138367 | 9144.51 |
| duf2693 domain-containing protein | DXC16_00795 | Not Available | Negative | 138379 - 138705 | 12790.6 |
| s24 family peptidase | DXC16_00800 | Not Available | Positive | 138867 - 139541 | 25156.7 |
| type i restriction endonuclease subunit r | DXC16_00805 | Not Available | Positive | 139547 - 140992 | 56880.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

