Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | DXC16_10580 | Not Available | Negative | 2340408 - 2341400 | 37968.6 |
| rna polymerase sigma-70 factor | DXC16_10585 | Not Available | Negative | 2341429 - 2342004 | 22518.4 |
| glycoside hydrolase family 92 protein | DXC16_10590 | Not Available | Negative | 2342209 - 2344431 | 83529.9 |
| hypothetical protein | DXC16_10595 | Not Available | Negative | 2344525 - 2345220 | 26753.6 |
| hypothetical protein | DXC16_10600 | Not Available | Positive | 2345380 - 2345658 | 10451.4 |
| arac family transcriptional regulator | DXC16_10605 | Not Available | Positive | 2345667 - 2346482 | 31074.5 |
| general stress protein | DXC16_10610 | Not Available | Positive | 2346556 - 2346963 | 15227.3 |
| atp-dependent clp protease adaptor clps | DXC16_10615 | Not Available | Positive | 2347192 - 2347500 | 12034.5 |
| aaa family atpase | DXC16_10620 | Not Available | Positive | 2347518 - 2349746 | 83032.6 |
| leucyl/phenylalanyl-trna--protein transferase | DXC16_10625 | Not Available | Positive | 2349842 - 2350495 | 24983.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

