Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_10375 | Not Available | Positive | 2296002 - 2298905 | 112641.0 |
| hypothetical protein | DXC16_10380 | Not Available | Positive | 2298902 - 2299216 | 12439.9 |
| hypothetical protein | DXC16_10385 | Not Available | Positive | 2299809 - 2300297 | 19340.2 |
| hypothetical protein | DXC16_10390 | Not Available | Positive | 2300418 - 2300819 | 14447.4 |
| s49 family peptidase | DXC16_10395 | Not Available | Positive | 2300881 - 2301747 | 32365.7 |
| hypothetical protein | DXC16_10400 | Not Available | Positive | 2301772 - 2303976 | 82180.8 |
| hypothetical protein | DXC16_10405 | Not Available | Positive | 2304035 - 2304841 | 28630.5 |
| hypothetical protein | DXC16_10410 | Not Available | Positive | 2304956 - 2305903 | 36250.4 |
| site-specific dna-methyltransferase | DXC16_10415 | Not Available | Positive | 2306060 - 2306734 | 25344.3 |
| helix-turn-helix domain containing protein | DXC16_10420 | Not Available | Positive | 2306709 - 2307053 | 12657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

