Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_10325 | Not Available | Negative | 2291722 - 2292015 | 11779.2 |
| duf454 domain-containing protein | DXC16_10330 | Not Available | Negative | 2292188 - 2292550 | 14099.0 |
| 6-carboxytetrahydropterin synthase qued | DXC16_10335 | Not Available | Positive | 2292685 - 2293017 | 12835.3 |
| radical sam protein | DXC16_10340 | Not Available | Positive | 2293004 - 2293549 | 20479.5 |
| xre family transcriptional regulator | DXC16_10345 | Not Available | Negative | 2293831 - 2294133 | 11266.6 |
| hypothetical protein | DXC16_10350 | Not Available | Positive | 2294246 - 2294497 | 9513.87 |
| hypothetical protein | DXC16_10355 | Not Available | Positive | 2294623 - 2294835 | 8432.48 |
| adenine methyltransferase | DXC16_10360 | Not Available | Positive | 2294832 - 2295314 | 18315.1 |
| hypothetical protein | DXC16_10365 | Not Available | Positive | 2295332 - 2295598 | 9898.85 |
| hypothetical protein | DXC16_10370 | Not Available | Positive | 2295797 - 2295979 | 7086.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

