Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DXC16_10275 | Not Available | Negative | 2277691 - 2278641 | 35751.7 |
| o-glcnacase | DXC16_10280 | Not Available | Negative | 2278656 - 2280869 | 84930.2 |
| recq family atp-dependent dna helicase | DXC16_10285 | Not Available | Negative | 2280916 - 2282811 | 72952.9 |
| single-stranded-dna-specific exonuclease recj | DXC16_10290 | Not Available | Negative | 2282929 - 2284701 | 66543.5 |
| aminopeptidase | DXC16_10295 | Not Available | Negative | 2284816 - 2286027 | 45970.4 |
| aminopeptidase p family protein | DXC16_10300 | Not Available | Negative | 2286056 - 2287447 | 51826.4 |
| patatin family protein | DXC16_10305 | Not Available | Positive | 2287777 - 2288631 | 32936.4 |
| hypothetical protein | DXC16_10310 | Not Available | Negative | 2288771 - 2289571 | 30025.9 |
| ribonuclease y | DXC16_10315 | Not Available | Negative | 2289763 - 2291298 | 57327.7 |
| cell division protein zapa | DXC16_10320 | Not Available | Negative | 2291399 - 2291692 | 11772.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

