Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | DXC16_10175 | Not Available | Positive | 2256359 - 2257660 | 47693.9 |
| hypothetical protein | DXC16_10180 | Not Available | Positive | 2257800 - 2257988 | 7252.13 |
| abc transporter atp-binding protein | DXC16_10185 | Not Available | Negative | 2258236 - 2259243 | 37158.8 |
| iron abc transporter permease | DXC16_10190 | Not Available | Negative | 2259243 - 2260274 | 36107.7 |
| abc transporter substrate-binding protein | DXC16_10195 | Not Available | Negative | 2260390 - 2261517 | 41765.8 |
| hypothetical protein | DXC16_10200 | Not Available | Negative | 2261519 - 2261986 | 17257.8 |
| hypothetical protein | DXC16_10205 | Not Available | Negative | 2262081 - 2263223 | 41077.3 |
| tonb-dependent receptor | DXC16_10210 | Not Available | Negative | 2263237 - 2265258 | 76714.7 |
| alpha/beta hydrolase | DXC16_10215 | Not Available | Positive | 2265813 - 2266784 | 34792.5 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DXC16_10220 | Not Available | Negative | 2267022 - 2267795 | 29390.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

