Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_10015 | Not Available | Positive | 2206817 - 2207134 | 11761.3 |
| hypothetical protein | DXC16_10020 | Not Available | Positive | 2207232 - 2207441 | 8074.99 |
| atp-binding protein | DXC16_10025 | Not Available | Positive | 2207673 - 2211608 | 153084.0 |
| radical sam protein | DXC16_10030 | Not Available | Positive | 2211666 - 2213012 | 51109.7 |
| hypothetical protein | DXC16_10035 | Not Available | Positive | 2213415 - 2214143 | 28307.4 |
| hypothetical protein | DXC16_10040 | Not Available | Negative | 2214336 - 2215103 | 30396.2 |
| sgnh/gdsl hydrolase family protein | DXC16_10045 | Not Available | Positive | 2215913 - 2216764 | 32546.0 |
| rna polymerase sigma-70 factor | DXC16_10055 | Not Available | Positive | 2218757 - 2219347 | 23285.1 |
| fecr family protein | DXC16_10060 | Not Available | Positive | 2219418 - 2220431 | 39115.7 |
| susc/raga family tonb-linked outer membrane protein | DXC16_10065 | Not Available | Positive | 2220681 - 2223995 | 122069.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

