Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DXC16_09965 | Not Available | Positive | 2194530 - 2196026 | 55215.1 |
| dna-binding protein | DXC16_09970 | Not Available | Positive | 2196341 - 2197849 | 59552.5 |
| site-specific integrase | DXC16_09975 | Not Available | Positive | 2197930 - 2199135 | 47124.9 |
| hypothetical protein | DXC16_09980 | Not Available | Positive | 2199276 - 2199968 | 26822.9 |
| dna-binding protein | DXC16_09985 | Not Available | Positive | 2199980 - 2200360 | 14813.9 |
| hypothetical protein | DXC16_09990 | Not Available | Positive | 2200572 - 2201297 | 28762.6 |
| dna-binding protein | DXC16_09995 | Not Available | Positive | 2201466 - 2201801 | 13133.3 |
| mobilization protein | DXC16_10000 | Not Available | Positive | 2201932 - 2203047 | 42425.0 |
| dna primase | DXC16_10005 | Not Available | Positive | 2203123 - 2204076 | 37174.2 |
| sel1 repeat family protein | DXC16_10010 | Not Available | Positive | 2205010 - 2206722 | 66287.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

