Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_09915 | Not Available | Negative | 2186267 - 2186641 | 14330.9 |
| hypothetical protein | DXC16_09920 | Not Available | Positive | 2186596 - 2186874 | 10801.4 |
| hypothetical protein | DXC16_09925 | Not Available | Negative | 2187023 - 2187304 | 10751.2 |
| hypothetical protein | DXC16_09930 | Not Available | Positive | 2187902 - 2188123 | 8477.08 |
| adenine nucleotide alpha hydrolase family protein | DXC16_09935 | Not Available | Negative | 2188817 - 2189572 | 29155.8 |
| hypothetical protein | DXC16_09940 | Not Available | Positive | 2189716 - 2191125 | 54158.7 |
| nodulation efficiency protein d (nfed) | DXC16_09945 | Not Available | Positive | 2191139 - 2191609 | 17112.5 |
| upf0365 family protein | DXC16_09950 | Not Available | Positive | 2191752 - 2192753 | 36124.0 |
| phosphorylase | DXC16_09955 | Not Available | Positive | 2192947 - 2193825 | 32767.5 |
| gaf domain-containing protein | DXC16_09960 | Not Available | Positive | 2194034 - 2194519 | 18138.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

