Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DXC16_09815 | Not Available | Positive | 2162097 - 2162885 | 30974.2 |
| class i sam-dependent rrna methyltransferase | DXC16_09820 | Not Available | Negative | 2163538 - 2164722 | 44449.1 |
| 3'-5' exonuclease domain-containing protein 2 | DXC16_09825 | Not Available | Negative | 2164712 - 2165362 | 24635.5 |
| duf5063 domain-containing protein | DXC16_09830 | Not Available | Negative | 2165359 - 2165922 | 21633.7 |
| dna translocase ftsk | DXC16_09835 | Not Available | Positive | 2166027 - 2168492 | 91840.0 |
| hypothetical protein | DXC16_09840 | Not Available | Positive | 2168509 - 2169123 | 22975.4 |
| thioredoxin-disulfide reductase | DXC16_09845 | Not Available | Positive | 2169193 - 2170140 | 34005.6 |
| insulinase family protein | DXC16_09850 | Not Available | Positive | 2170171 - 2172990 | 106220.0 |
| hypothetical protein | DXC16_09855 | Not Available | Positive | 2173000 - 2174487 | 57462.9 |
| abc transporter atp-binding protein | DXC16_09860 | Not Available | Positive | 2174500 - 2175207 | 26432.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

