Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4836 family protein | DXC16_09760 | Not Available | Negative | 2152272 - 2153804 | 56148.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DXC16_09765 | Not Available | Negative | 2153809 - 2154510 | 26175.7 |
| dna helicase uvrb | DXC16_09770 | Not Available | Negative | 2154539 - 2155105 | 21270.7 |
| mfs transporter | DXC16_09775 | Not Available | Negative | 2155164 - 2156441 | 46736.2 |
| duf5024 domain-containing protein | DXC16_09780 | Not Available | Negative | 2156643 - 2157257 | 22972.6 |
| hypothetical protein | DXC16_09785 | Not Available | Negative | 2157279 - 2157845 | 21072.0 |
| sigma-70 family rna polymerase sigma factor | DXC16_09790 | Not Available | Negative | 2157836 - 2158306 | 18010.0 |
| galactose mutarotase | DXC16_09795 | Not Available | Negative | 2158493 - 2159626 | 41888.4 |
| sigma-70 family rna polymerase sigma factor | DXC16_09805 | Not Available | Positive | 2160260 - 2160805 | 20808.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | DXC16_09810 | Not Available | Positive | 2160802 - 2162040 | 47303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

