Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DXC16_09710 | Not Available | Positive | 2141535 - 2142824 | 48530.8 |
| histidine kinase | DXC16_09715 | Not Available | Positive | 2142965 - 2143993 | 38942.7 |
| dna-binding response regulator | DXC16_09720 | Not Available | Positive | 2143986 - 2144759 | 29809.8 |
| hypothetical protein | DXC16_09725 | Not Available | Negative | 2144788 - 2145060 | 10520.9 |
| aldehyde dehydrogenase family protein | DXC16_09730 | Not Available | Negative | 2145312 - 2148632 | 124012.0 |
| hypothetical protein | DXC16_09735 | Not Available | Negative | 2149003 - 2149608 | 23278.7 |
| hypothetical protein | DXC16_09740 | Not Available | Positive | 2149795 - 2149980 | 7314.11 |
| yjbq family protein | DXC16_09745 | Not Available | Negative | 2150010 - 2150423 | 15533.7 |
| abc transporter permease | DXC16_09750 | Not Available | Negative | 2150432 - 2151634 | 44901.3 |
| atp-binding cassette domain-containing protein | DXC16_09755 | Not Available | Negative | 2151631 - 2152275 | 24451.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

