Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | DXC16_09655 | Not Available | Positive | 2125561 - 2126001 | 15733.6 |
| gmp synthase (glutamine-hydrolyzing) | DXC16_09660 | Not Available | Positive | 2126238 - 2127791 | 57645.2 |
| glutamine-hydrolyzing gmp synthase | DXC16_09665 | Not Available | Positive | 2127830 - 2129137 | 48253.4 |
| aminopeptidase p family protein | DXC16_09670 | Not Available | Negative | 2129294 - 2130454 | 42418.8 |
| hypothetical protein | DXC16_09675 | Not Available | Positive | 2130571 - 2130993 | 16008.7 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_09680 | Not Available | Positive | 2131116 - 2132267 | 43842.2 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DXC16_09685 | Not Available | Positive | 2132280 - 2135429 | 115634.0 |
| tolc family protein | DXC16_09690 | Not Available | Positive | 2135407 - 2136864 | 54862.1 |
| glsb/yeaq/ymge family stress response membrane protein | DXC16_09695 | Not Available | Negative | 2136953 - 2137204 | 8688.23 |
| acrb/acrd/acrf family protein | DXC16_09705 | Not Available | Positive | 2138489 - 2141548 | 113016.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

