Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DXC16_09605 | Not Available | Negative | 2113639 - 2115072 | 53881.0 |
| hypothetical protein | DXC16_09610 | Not Available | Negative | 2115135 - 2117333 | 86162.9 |
| glutamine synthetase type iii | DXC16_09615 | Not Available | Positive | 2117509 - 2119698 | 82847.0 |
| crp/fnr family transcriptional regulator | DXC16_09620 | Not Available | Positive | 2119860 - 2120561 | 26605.4 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | DXC16_09625 | Not Available | Positive | 2120691 - 2120843 | 5511.84 |
| ferritin | DXC16_09630 | Not Available | Positive | 2120876 - 2121388 | 19740.4 |
| 3-deoxy-8-phosphooctulonate synthase | DXC16_09635 | Not Available | Negative | 2121549 - 2122346 | 28835.3 |
| yegs/rv2252/bmru family lipid kinase | DXC16_09640 | Not Available | Negative | 2122419 - 2123348 | 35331.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DXC16_09645 | Not Available | Negative | 2123354 - 2124277 | 35776.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DXC16_09650 | Not Available | Negative | 2124399 - 2125409 | 35961.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

